Robert A. Petit III, PhD

Robert A. Petit III, PhD rpetit3

A classically trained bioinformatician working on bacterial genomics, Bactopia, and local inference of open-weight models.

Organizations

6 results for Surveillance

Pangenome-GWAS analysis of Clostridioides difficile resistant traits from healthcare- and non-healthcare-associated settings
Clostridioides difficile ( C.
pathogens resistance surveillance Published Thu, 01 Jan 2026 00:00:00 +0000
Putting everything in its place: using the INSDC compliant Pathogen Data Object Model to better structure genomic data submitted for public health applications
Fast, efficient public health actions require well-organized and coordinated systems that can supply timely and accurate knowledge.
data sequencing surveillance Published Tue, 12 Dec 2023 00:00:00 +0000
Mycobacterium tuberculosis epidemiology in Oman: whole-genome sequencing uncovers transmission pathways.
We report evidence that WGS can complement epidemiological analysis to achieve the End TB strategy goal in Oman.
pathogens sequencing surveillance Published Thu, 28 Sep 2023 00:00:00 +0000
Accelerating bioinformatics implementation in public health
We have adopted an open bioinformatics ecosystem to address the challenges of bioinformatics implementation in public health laboratories (PHLs).
surveillance tools Published Mon, 10 Jul 2023 00:00:00 +0000
Unrecognized introductions of SARS-CoV-2 into the US state of Georgia shaped the early epidemic
We report the early introductions of SARS-CoV-2 in the US state of Georgia
pathogens surveillance Published Tue, 15 Feb 2022 00:00:00 +0000
StarCluster-Plugins
A few plugins created for Staphopia’s StarCluster instances
staphopia surveillance